研究领域

医学统计、医学设计中的因果推断、应用数学


教育背景

中山大学( 2011年9月——2015年7月) 理学学士学位,数学与计算科学学院;逸仙学院;辅修金融学(岭南学院)

清华大学(2015年8月——2020年6月) 理学博士学位,丘成桐数学科学中心 导师:丘成栋(Stephen S.-T. Yau)教授(研究领域:生物数学、生物信息学)


工作经历

清华大学丘成桐数学科学中心 & 北京雁栖湖应用数学研究院(2020年9月至今) 博士后(导师:Donald Rubin教授)


荣誉与奖励

清华大学一等奖学金;2020年北京市优秀毕业生;丘成桐数学科学中心奖学金;中山大学一等奖学金


发表论文

1. Rui Dong*, Taojun Hu*, et al. Assessing the transmissibility of the new SARS-CoV-2 variants: from Delta to Omicron. Vaccines (Special Issue: COVID-19: Epidemiology and Transmission), 2022, 10(4), 496. https://www.mdpi.com/2076-393X/10/4/496

2. Rui Dong, Shaojun Pei, et al. Full chromosomal relationships between populations and the origin of humans. Frontiers in Genetics, 2022, 12: 828805. https://www.frontiersin.org/articles/10.3389/fgene.2021.828805/full

3. Rui Dong*, Shaojun Pei*, et al. Analysis of the hosts and transmission paths of SARS-CoV-2 in the COVID-19 outbreak. Genes, 2020, 11(6), 637. https://www.mdpi.com/2073-4425/11/6/637

4. Shaojun Pei, Rui Dong, et al. Classification of genomic components and prediction of genes of Begomovirus based on subsequence natural vector and support vector machine. PeerJ, 2020, 8, e9625. https://peerj.com/articles/9625/

5. Lily He, Rui Dong, et al. Positional correlation natural vector: a novel method for genome comparison. International Journal of Molecular Sciences, 2020, 21(11), 3859. https://www.mdpi.com/1422-0067/21/11/3859

6. Lily He*, Rui Dong*, et al. A novel alignment-free method for HIV-1 subtype classification. Infection, Genetics and Evolution, 2020, 77, 104080. https://doi.org/10.1016/j.meegid.2019.104080

7. Nan Sun*, Rui Dong*, et al. A new method based on coding sequence density to cluster bacteria. Journal of Computational Biology, 2020, 27(12), 1688-1698. https://www.liebertpub.com/doi/10.1089/cmb.2019.0509

8. Rui Dong, Lily He, et al. A novel approach to clustering genome sequences using inter-nucleotide covariance. Frontiers in Genetics, 2019, 10, 234. https://doi.org/10.3389/fgene.2019.00234

9. Shaojun Pei, Rui Dong, et al. Large-scale genome comparison based on cumulative Fourier power and phase spectra: central moment and covariance vector. Computational and Structural Biotechnology Journal, 2019, 17, 982-994. https://doi.org/10.1016/j.csbj.2019.07.003

10. Rui Dong*, Ziyue Zhu*, et al. A new method to cluster genomes based on cumulative Fourier power spectrum. Gene, 2018, 673, 239-250. https://doi.org/10.1016/j.gene.2018.06.042

11. Rui Dong, Hui Zheng, et al. Virus database and online inquiry system based on natural vectors. Evolutionary Bioinformatics, 2017, 13, 1-7. https://doi.org/10.1177/1176934317746667